Gene Model: AT5G53020.1 [Help]
Name (?)    AT5G53020.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Ribonuclease P protein subunit P38-like protein;(source:Araport11)
Chromosome   5
Locus (?)    AT5G53020 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   cytoplasm
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_124681  full length genomic
genomic   full length CDS
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT5G53020.1    720    83829.9    7.9484   
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
5 AGI nuc_sequence 21499899 - 21502401 bp forward   details
5 MNB8 assembly_unit 23380 - 25882 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-2337      
coding_region   1-931      
coding_region   1019-1869      
coding_region   1957-2337      
exon   1-931      
intron   932-1018      
exon   1019-1869      
intron   1870-1956      
exon   1957-2503      
3' utr   2338-2503      
Polymorphism (?)
Showing 15 of 30 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
BKN000011927   substitution   exon   unknown
BKN000011927   substitution   coding_region   unknown
BKN000011928   substitution   coding_region   unknown
BKN000011928   substitution   exon   unknown
BKN000011929   substitution   exon   unknown
BKN000011929   substitution   coding_region   unknown
BKN000011930   substitution   coding_region   unknown
BKN000011930   substitution   exon   unknown
FLAG_553D11   insertion   promoter   unknown
GK-149H11-013072   insertion   exon   unknown
GK-771G10-024644   insertion   exon   unknown
GK-771G10-024649   insertion   exon   unknown
MASC01438   substitution   coding_region   unknown
MASC01439   substitution   coding_region   unknown
MASC08231   substitution   3'UTR   unknown
Germplasm
(?)
Showing 3 of 3 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS414303   GK-149H11-013072     CS414303  
Images
None available  
Phenotypes (?)
None available
SALK_044660   SALK_044660     SALK_044660  
Images
None available  
Phenotypes (?)
None available
SALK_044660C   SALK_044660     SALK_044660C  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to unknown protein (emb CAB82814.1)   2002-05-03
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2168401

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