Gene Model: AT5G19660.1 [Help]
Name (?)    AT5G19660.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro.
Chromosome   5
Locus (?)    AT5G19660 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
ATSBT6.1        
S1P     SITE-1 PROTEASE    
ATS1P     SITE-1 PROTEASE    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   extracellular region, Golgi apparatus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-30 00:00:00.0 NM_121971  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT5G19660.1    1038    116150.0    6.8229    Peptidase S8, subtilisin, Ser-active site:IPR023828(1)
                Peptidase S8/S53, subtilisin/kexin/sedolisin:IPR000209(3)
                Peptidase S8, subtilisin, His-active site:IPR022398(1)
                Peptidase S8, subtilisin-related:IPR015500(4)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
5 AGI nuc_sequence 6642004 - 6646530 bp reverse   details
5 T29J13 assembly_unit 31127 - 35653 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   113-4413      
5' utr   1-112      
coding_region   113-661      
coding_region   792-920      
coding_region   1061-1213      
coding_region   1494-1610      
coding_region   1734-1918      
coding_region   2029-2292      
coding_region   2397-3465      
coding_region   3563-4066      
coding_region   4149-4209      
coding_region   4328-4413      
exon   1-661      
intron   662-791      
exon   792-920      
intron   921-1060      
exon   1061-1213      
intron   1214-1493      
exon   1494-1610      
intron   1611-1733      
exon   1734-1918      
intron   1919-2028      
exon   2029-2292      
intron   2293-2396      
exon   2397-3465      
intron   3466-3562      
exon   3563-4066      
intron   4067-4148      
exon   4149-4209      
intron   4210-4327      
exon   4328-4527      
3' utr   4414-4527      
Polymorphism (?)
Showing 15 of 44 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_426G05   insertion   intron   unknown
GK-122C05-012551   insertion   exon   unknown
GK-122C05-028242   insertion   exon   unknown
GK-122C05-028302   insertion   exon   unknown
ossowski_1168507   insertion   promoter   unknown
ossowski_879221   substitution   coding_region   unknown
ossowski_879222   substitution   coding_region   unknown
ossowski_879225   substitution   intron   unknown
ossowski_879228   substitution   coding_region   unknown
ossowski_879229   substitution   coding_region   unknown
ossowski_879230   substitution   coding_region   unknown
ossowski_879232   substitution   coding_region   unknown
ossowski_879233   substitution   coding_region   unknown
ossowski_879234   substitution   coding_region   unknown
ossowski_879235   substitution   intron   unknown
Germplasm
(?)
Showing 12 of 12 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS411645   GK-122C05-012551     CS411645  
Images
None available  
Phenotypes (?)
None available
s1p-3   s1p-3     not an ABRC stock  
Images
None available  
Phenotypes (?)
  • s1p-3 mutants exhibit a greater inhibition of primary root elongation in response to NaCl, KCl, LiCl, and mannitol than wild-type seedlings. The salt-sensitive phenotype co-segregates with the s1p-3 T-DNA insertion, and can be partially rescued by a 35S:S1P construct. s1p-3 mutants do not show the proteolytic processing of a 4xMyc:bZIP17 protein from an 84 kD to a 46-kD protein, as observed in wild type seedlings. In addition, several salt-responsive transcripts have more than a 2.5-fold lower transcriptional response in s1p-3 mutants than in wild type seedlings. Liu, Jian-Xiang, Srivastava, Renu, Che, Ping, Howell, Stephen H(2007)

SALK_000681   SALK_000681     SALK_000681  
Images
None available  
Phenotypes (?)
None available
SALK_006592   s1p-4     SALK_006592  
Images
None available  
Phenotypes (?)
None available
SALK_006866   s1p-5     SALK_006866  
Images
None available  
Phenotypes (?)
None available
SALK_020326   SALK_020326.56.00.x     SALK_020326  
Images
None available  
Phenotypes (?)
None available
SALK_020326C   SALK_020326.56.00.x     SALK_020326C  
Images
None available  
Phenotypes (?)
None available
SALK_020530   s1p-3     SALK_020530  
Images
None available  
Phenotypes (?)
None available
SALK_026019   SALK_026019.37.45.x     SALK_026019  
Images
None available  
Phenotypes (?)
None available
SALK_097923   s1p-1     SALK_097923  
Images
None available  
Phenotypes (?)
None available
SALK_097923C   s1p-1     SALK_097923C  
Images
None available  
Phenotypes (?)
None available
SALK_111474   s1p-2     SALK_111474  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   subtilisin kexin isozyme SKI-1 precursor - Rattus norvegicus, EMBL:AF094821   2002-05-03
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Liu, JianXiang Srivastava, Renu Howell, Stephen H
ER stress sensor/transducers perceive and mitigate environmental stresses
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
*Wolf, Sebastian, Rausch, Thomas and Steffen Greiner
Processing of Type I Pectin Methylesterase in the Golgi Apparatus: Prerequisite for Extracellular Targeting
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
Chevalier, Eric Loubert Hudon, Audrey *Matton, Daniel P
Processing of the RALF peptide hormone in plants
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
Jianxiang Liu, Renu Srivastava, Ping Che, Stephen Howell
ER stress activates the processing and relocation to the nucleus of ER membrane-bound transcription factors
    18TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2007
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2183223

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