Gene Model: AT4G18530.1 [Help]
Name (?)    AT4G18530.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707);(source:Araport11)
Chromosome   4
Locus (?)    AT4G18530 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic   full length genomic
genomic   full length cDNA
genomic   full length CDS
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT4G18530.1    389    45176.4    8.768    Protein of unknown function DUF707:IPR007877(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
4 AGI nuc_sequence 10217338 - 10220500 bp forward   details
4 F28J12 assembly_unit 76654 - 79816 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   412-2948      
5' utr   1-411      
coding_region   412-420      
coding_region   821-925      
coding_region   1143-1226      
coding_region   1309-1413      
coding_region   1507-1590      
coding_region   1675-1793      
coding_region   1876-1977      
coding_region   2051-2233      
coding_region   2321-2387      
coding_region   2464-2517      
coding_region   2604-2729      
coding_region   2817-2948      
exon   1-420      
intron   421-820      
exon   821-925      
intron   926-1142      
exon   1143-1226      
intron   1227-1308      
exon   1309-1413      
intron   1414-1506      
exon   1507-1590      
intron   1591-1674      
exon   1675-1793      
intron   1794-1875      
exon   1876-1977      
intron   1978-2050      
exon   2051-2233      
intron   2234-2320      
exon   2321-2387      
intron   2388-2463      
exon   2464-2517      
intron   2518-2603      
exon   2604-2729      
intron   2730-2816      
exon   2817-3163      
3' utr   2949-3163      
Polymorphism (?)
Showing 15 of 36 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_096D07   insertion   exon   unknown
FLAG_096D07   insertion   promoter   unknown
FLAG_099C08   insertion   promoter   unknown
FLAG_099C08   insertion   exon   unknown
FLAG_481D08   insertion   exon   unknown
FLAG_486E06   insertion   intron   unknown
GK-102B07-012380   insertion   intron   unknown
GK-144D10-012978   insertion   promoter   unknown
GK-840D09-025827   insertion   exon   unknown
GK-840D09-025828   insertion   exon   unknown
GK-875A09-026467   insertion   promoter   unknown
GK-875A09-026467   insertion   exon   unknown
GK-922E02-030999   insertion   exon   unknown
ossowski_1211913   deletion   intron   unknown
ossowski_779064   substitution   promoter   unknown
Germplasm
(?)
Showing 12 of 12 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS409715   GK-102B07-012380     CS409715   not available
Images
None available  
Phenotypes (?)
None available
SAIL_104_D02   SAIL_104_D02.v1; SAILseq_104_D02.0     CS805008  
Images
None available  
Phenotypes (?)
None available
SALK_036363   SALK_036363     SALK_036363  
Images
None available  
Phenotypes (?)
None available
SALK_036363C   SALK_036363     SALK_036363C  
Images
None available  
Phenotypes (?)
None available
SALK_042432   SALK_042432; SALKseq_042432.0     SALK_042432  
Images
None available  
Phenotypes (?)
None available
SALK_053638   SALK_053638.54.75.x     SALK_053638  
Images
None available  
Phenotypes (?)
None available
SALK_056020   SALK_056020.51.25.x     SALK_056020  
Images
None available  
Phenotypes (?)
None available
SALK_070805   SALK_070805.56.00.x     SALK_070805  
Images
None available  
Phenotypes (?)
None available
SALK_070805C   SALK_070805.56.00.x     SALK_070805C  
Images
None available  
Phenotypes (?)
None available
SALK_116523   SALK_116523.30.85.x; SALK_116523.1     SALK_116523  
Images
None available  
Phenotypes (?)
None available
SALK_118917   SALK_118917.15.80.n     SALK_118917  
Images
None available  
Phenotypes (?)
None available
SALK_118919   SALK_118919.56.00.x; SALK_118919.0     SALK_118919  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2124607

printer-friendly version