Gene Model: AT4G01190.1 [Help]
Name (?)    AT4G01190.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
Chromosome   4
Locus (?)    AT4G01190 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
ATPIPK10     PHOSPHATIDYLINOSITOL PHOSPHATE KINASE 10    
PIPK10     PHOSPHATIDYLINOSITOL PHOSPHATE KINASE 10    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-29 00:00:00.0 NM_116349  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT4G01190.1    401    45658.4    8.4293    Phosphatidylinositol-4-phosphate 5-kinase:IPR023610(1)
                Phosphatidylinositol-4-phosphate 5-kinase, core:IPR002498(2)
                Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup:IPR016034(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
4 AGI nuc_sequence 504211 - 506131 bp reverse   details
4 F2N1 assembly_unit 54456 - 56376 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-1921      
coding_region   1-119      
coding_region   209-371      
coding_region   469-579      
coding_region   660-847      
coding_region   941-1032      
coding_region   1122-1169      
coding_region   1263-1358      
coding_region   1442-1550      
coding_region   1642-1921      
exon   1-119      
intron   120-208      
exon   209-371      
intron   372-468      
exon   469-579      
intron   580-659      
exon   660-847      
intron   848-940      
exon   941-1032      
intron   1033-1121      
exon   1122-1169      
intron   1170-1262      
exon   1263-1358      
intron   1359-1441      
exon   1442-1550      
intron   1551-1641      
exon   1642-1921      
Polymorphism (?)
Showing 15 of 32 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
ET11240.Ds5.04.02.2003.jw86.532   insertion   exon   unknown
GT10478.Ds5.04.27.2002.jw28.364   insertion   exon   unknown
GT12781.Ds5.01.29.2004.jx50.718   insertion   intron   unknown
ossowski_1207229   deletion   intron   unknown
ossowski_659733   substitution   splice_junction   unknown
ossowski_659734   substitution   intron   unknown
ossowski_659735   substitution   intron   unknown
ossowski_659736   substitution   intron   unknown
ossowski_659737   substitution   intron   unknown
ossowski_659738   substitution   intron   unknown
ossowski_659739   substitution   coding_region   unknown
ossowski_659740   substitution   intron   unknown
ossowski_659743   substitution   intron   unknown
ossowski_659744   substitution   intron   unknown
ossowski_659745   substitution   promoter   unknown
Germplasm
(?)
Showing 7 of 7 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_167_F04   SAIL_167_F04     CS871731  
Images
None available  
Phenotypes (?)
None available
SALK_066683   SALK_066683; SALKseq_066683.1     SALK_066683  
Images
None available  
Phenotypes (?)
None available
SALK_066683C   SALK_066683.53.95.x     SALK_066683C  
Images
None available  
Phenotypes (?)
None available
SALK_079111   SALK_079111.56.00.x; SALKseq_079111.2; SALKseq_079111.1     SALK_079111  
Images
None available  
Phenotypes (?)
None available
SALK_119243   SALK_119243.46.20.x; SALK_119243.0     SALK_119243  
Images
None available  
Phenotypes (?)
None available
SALK_119243C   SALK_119243.46.20.x     SALK_119243C  
Images
None available  
Phenotypes (?)
None available
WiscDsLox428H01   WiscDsLox428H01     CS855387  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to A. thaliana 4,5 PIP kinase, GenBank accession number Y12776   2002-05-03
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Davis, Amanda J, Im, Yang Ju, Dubin, Joshua S, Tomer, Kenneth B, Boss, Wendy F
Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta 1 to the actin cytoskeleton.
    JOURNAL OF BIOLOGICAL CHEMISTRY     2007
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2125097

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