Gene Model: AT3G55690.1 [Help]
Name (?)    AT3G55690.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    hypothetical protein;(source:Araport11)
Chromosome   3
Locus (?)    AT3G55690 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   chloroplast
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_115427  full length CDS
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_115427  full length genomic
genomic   full length cDNA
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G55690.1    293    32106.0    7.3765   
Map Locations
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 20666972 - 20668505 bp forward   details
3 F1I16 assembly_unit 55060 - 56593 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   64-1233      
5' utr   1-63      
coding_region   64-333      
coding_region   423-858      
coding_region   974-1090      
coding_region   1175-1233      
exon   1-333      
intron   334-422      
exon   423-858      
intron   859-973      
exon   974-1090      
intron   1091-1174      
exon   1175-1534      
3' utr   1234-1534      
Polymorphism (?)
Showing 15 of 21 entries
(see all)
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_546H10   insertion   exon   unknown
GK-057D07-016084   insertion   promoter   unknown
ossowski_1157024   insertion   promoter   unknown
ossowski_1157025   insertion   promoter   unknown
ossowski_1157026   insertion   5'UTR   unknown
ossowski_1157027   insertion   intron   unknown
ossowski_1157029   insertion   3'UTR   unknown
ossowski_1205953   deletion   intron   unknown
ossowski_636505   substitution   5'UTR   unknown
ossowski_636506   substitution   coding_region   unknown
ossowski_636508   substitution   coding_region   unknown
ossowski_636512   substitution   coding_region   unknown
ossowski_636513   substitution   3'UTR   unknown
PERL0638232   substitution   promoter   unknown
PERL0638233   substitution   promoter   unknown
Showing 7 of 7 entries
Name   Polymorphisms   Background   Stock Name   Select
SAIL_692_D12   SAIL_692_D12.v1; SAILseq_692_D12.1     CS830411  
None available  
Phenotypes (?)
None available
SALK_029589   SALK_029589.56.00.x     SALK_029589  
None available  
Phenotypes (?)
None available
SALK_029589C   SALK_029589.56.00.x     SALK_029589C  
None available  
Phenotypes (?)
None available
SALK_046346   SALKseq_046346.0; SALK_046346.55.75.x; SALKseq_046346.1     SALK_046346  
None available  
Phenotypes (?)
None available
SALK_046346C   SALK_046346.55.75.x     SALK_046346C  
None available  
Phenotypes (?)
None available
SALK_139672   SALK_139672.32.40.x     SALK_139672  
None available  
Phenotypes (?)
None available
SALK_139674   SALKseq_139674.0; SALK_139674.54.75.x     SALK_139674  
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   predicted proteins, Arabidopsis thaliana   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2078905

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