Gene Model: AT3G49750.1 [Help]
Name (?)    AT3G49750.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    receptor like protein 44;(source:Araport11)
Chromosome   3
Locus (?)    AT3G49750 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
AtRLP44     RECEPTOR LIKE PROTEIN 44    
RLP44     RECEPTOR LIKE PROTEIN 44    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   plasma membrane
Plant structure   expressed in   cultured plant cell
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_114835  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G49750.1    274    29993.1    8.1079    Toll-like receptor, leucine rich repeat-containing:IPR020474(2)
                Leucine-rich repeat:IPR001611(2)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 18450426 - 18451494 bp reverse   details
3 T16K5 assembly_unit 40178 - 41246 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   67-891      
5' utr   1-66      
coding_region   67-891      
exon   1-1069      
3' utr   892-1069      
Polymorphism (?)
Showing 13 of 13 entries
 
name (?)   type (?)   Polymorphism site   Allele type (?)
atrlp44-1   insertion   promoter   unknown
atrlp44-2   insertion   promoter   unknown
GK-820A03-025609   insertion   promoter   unknown
GK-820A03-025640   insertion   promoter   unknown
ossowski_1204971   deletion   promoter   unknown
ossowski_1204973   deletion   promoter   unknown
ossowski_1204974   deletion   promoter   unknown
ossowski_618952   substitution   coding_region   unknown
ossowski_618953   substitution   promoter   unknown
ossowski_618954   substitution   promoter   unknown
SAIL_596_E12.v1   insertion   exon   unknown
SALK_057801.46.65.x   insertion   promoter   unknown
SALK_124742.40.45.x   insertion   promoter   unknown
Germplasm
(?)
Showing 9 of 9 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS65488   atrlp44-1     CS65488  
Images
None available  
Phenotypes (?)
  • No visible phenotype. Phenotype curated by ABRC.

CS65489   atrlp44-2     CS65489  
Images
None available  
Phenotypes (?)
  • No visible phenotype. Phenotype curated by ABRC.

SAIL_596_E12   SAIL_596_E12.v1; SAILseq_596_E12.1; SAILseq_596_E12.0     CS825413  
Images
None available  
Phenotypes (?)
None available
SALK_045246   atrlp44-2; SALKseq_045246.1     SALK_045246  
Images
None available  
Phenotypes (?)
None available
SALK_045246C   atrlp44-2     SALK_045246C  
Images
None available  
Phenotypes (?)
None available
SALK_057801   SALK_057801.46.65.x; SALKseq_057801.0     SALK_057801  
Images
None available  
Phenotypes (?)
None available
SALK_057801C   SALK_057801.46.65.x     SALK_057801C  
Images
None available  
Phenotypes (?)
None available
SALK_097350   atrlp44-1     SALK_097350  
Images
None available  
Phenotypes (?)
None available
SALK_124742   SALK_124742.40.45.x     SALK_124742  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   resistance gene Hcr2-5B, Lycopersicon esculentum, EMBL:AF053997   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Marmagne, Anne, Ferro, Myriam, Meinnel, Thierry, Bruley, Christophe, Kuhn, Lauriane, Garin, Jerôme, Barbier-Brygoo, Hélène, Ephritikhine, Geneviève
A high content in lipid-modified peripheral proteins and integral receptor kinases features the Arabidopsis plasma membrane proteome.
    MOLECULAR & CELLULAR PROTEOMICS : MCP.     2007
Duarte, Jill M, Cui, Liying, Wall, P Kerr, Zhang, Qing, Zhang, Xiaohong, Leebens-Mack, Jim, Ma, Hong, Altman, Naomi, Depamphilis, Claude W
Expression Pattern Shifts Following Duplication Indicative of Subfunctionalization and Neofunctionalization in Regulatory Genes of Arabidopsis.
    MOLECULAR BIOLOGY AND EVOLUTION     2005
Kobe,B,Kajava,AV
The leucine-rich repeat as a protein recognition motif.
    CURRENT OPINION IN STRUCTURAL BIOLOGY     2001
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2097304

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