Gene Model: AT3G28680.1 [Help]
Name (?)    AT3G28680.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Serine carboxypeptidase S28 family protein;(source:Araport11)
Chromosome   3
Locus (?)    AT3G28680 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_113788  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G28680.1    199    22633.8    9.0562    Peptidase S28:IPR008758(2)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 10748751 - 10749734 bp reverse   details
3 MZN14 assembly_unit 51318 - 52301 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   2-984      
5' utr   1-1      
coding_region   2-202      
coding_region   282-394      
coding_region   483-643      
coding_region   741-832      
coding_region   952-984      
exon   1-202      
intron   203-281      
exon   282-394      
intron   395-482      
exon   483-643      
intron   644-740      
exon   741-832      
intron   833-951      
exon   952-984      
Polymorphism (?)
Showing 14 of 14 entries
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_335D12   insertion   promoter   unknown
FLAG_515H06   insertion   intron   unknown
GK-610C11-021891   insertion   intron   unknown
ossowski_1152823   insertion   coding_region   unknown
ossowski_1201739   deletion   coding_region   unknown
ossowski_1201740   deletion   intron   unknown
ossowski_518800   substitution   intron   unknown
ossowski_518803   substitution   promoter   unknown
ossowski_518804   substitution   promoter   unknown
ossowski_518806   substitution   promoter   unknown
PERL0513474   substitution   exon   unknown
PERL0513496   substitution   exon   unknown
PERL0513499   substitution   exon   unknown
PERL0513502   substitution   exon   unknown
Germplasm
(?)
Showing 1 of 1 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS458493   GK-610C11-021891     CS458493   not available
Images
None available  
Phenotypes (?)
None available
External Link   
Plant Proteome Database
AGI-TIGR's comment   predicted by genemark.hmm   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2095506

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