Gene Model: AT3G26770.1 [Help]
Name (?)    AT3G26770.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)
Chromosome   3
Locus (?)    AT3G26770 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-11-17 17:57:00.0 NM_113589  full length CDS
genomic   full length cDNA
genomic   full length genomic
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G26770.1    306    31783.3    7.9874    Short-chain dehydrogenase/reductase SDR:IPR002198(5)
                Glucose/ribitol dehydrogenase:IPR002347(6)
                NAD(P)-binding domain:IPR016040(2)
Map Locations
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 9845396 - 9847148 bp forward   details
3 MDJ14 assembly_unit 11863 - 13615 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   99-1684      
5' utr   1-98      
coding_region   99-133      
coding_region   216-293      
coding_region   590-1020      
coding_region   1308-1684      
exon   1-133      
intron   134-215      
exon   216-293      
intron   294-589      
exon   590-1020      
intron   1021-1307      
exon   1308-1753      
3' utr   1685-1753      
Polymorphism (?)
Showing 15 of 22 entries
(see all)
name (?)   type (?)   Polymorphism site   Allele type (?)
GT7195.Ds5.07.07.00.b.185   insertion   exon   unknown
ossowski_1152221   insertion   promoter   unknown
ossowski_506286   substitution   promoter   unknown
ossowski_506287   substitution   promoter   unknown
ossowski_506288   substitution   promoter   unknown
ossowski_506289   substitution   promoter   unknown
ossowski_506290   substitution   promoter   unknown
ossowski_506292   substitution   coding_region   unknown
ossowski_506293   substitution   coding_region   unknown
ossowski_506294   substitution   coding_region   unknown
ossowski_506295   substitution   coding_region   unknown
ossowski_506296   substitution   coding_region   unknown
ossowski_506297   substitution   coding_region   unknown
ossowski_506299   substitution   coding_region   unknown
ossowski_506300   substitution   coding_region   unknown
Showing 3 of 3 entries
Name   Polymorphisms   Background   Stock Name   Select
SALK_080859   SALKseq_080859.1; SALKseq_080859.0; SALK_080859.52.15.x     SALK_080859  
None available  
Phenotypes (?)
None available
SALK_080859C   SALK_080859.52.15.x     SALK_080859C  
None available  
Phenotypes (?)
None available
WiscDsLox481-484F19   WiscDsLox481-484F19.2; WiscDsLox481-484F19     CS857964  
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   contains Pfam profile: PF00106 short chain dehydrogenase; similar to sex determination protein tasselseed 2 GB:P50160 (Zea mays); supported by cDNA: gi 15529183 gb AY052216.1   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
Publication (?)   
author/title     source     date
Duarte, Jill M, Cui, Liying, Wall, P Kerr, Zhang, Qing, Zhang, Xiaohong, Leebens-Mack, Jim, Ma, Hong, Altman, Naomi, Depamphilis, Claude W
Expression Pattern Shifts Following Duplication Indicative of Subfunctionalization and Neofunctionalization in Regulatory Genes of Arabidopsis.
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2088398

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