Gene Model: AT3G25270.1 [Help]
Name (?)    AT3G25270.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Ribonuclease H-like superfamily protein;(source:Araport11)
Chromosome   3
Locus (?)    AT3G25270 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_113433  full length CDS
genomic   full length cDNA
genomic   full length genomic
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G25270.1    343    40582.9    9.9744    Ribonuclease H-like:IPR012337(1)
                RNA-directed DNA polymerase (reverse transcriptase:IPR015706(1)
Map Locations
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 9203934 - 9204965 bp reverse   details
3 MJL12 assembly_unit 72985 - 74016 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-1032      
coding_region   1-1032      
exon   1-1032      
Polymorphism (?)
Showing 15 of 15 entries
name (?)   type (?)   Polymorphism site   Allele type (?)
AMU-3-127   deletion   unknown   unknown
AMU-3-127   deletion   unknown   unknown
ossowski_501125   substitution   coding_region   unknown
ossowski_501128   substitution   promoter   unknown
ossowski_501129   substitution   promoter   unknown
ossowski_501130   substitution   promoter   unknown
ossowski_501131   substitution   promoter   unknown
PERL0492992   substitution   exon   unknown
PERL0492992   substitution   promoter   unknown
PERL0492998   substitution   exon   unknown
PERL0493000   substitution   exon   unknown
PERL0493022   substitution   exon   unknown
PERL0493036   substitution   promoter   unknown
PERL0493039   substitution   promoter   unknown
WiscDsLox382G8   insertion   exon   unknown
Showing 1 of 1 entries
Name   Polymorphisms   Background   Stock Name   Select
WiscDsLox382G8   WiscDsLox382G8     CS853679  
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to C-term of reverse transcriptase GB:S65812 (Arabidopsis thaliana)   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
Publication (?)   
author/title     source     date
*Town, Chris Redman, Julia Zhuang, Jun Monaghan, Erin Wang, Wei Moskal, William Wu, Hank Quan, Hui Underwood, Beverly Xiao, Yongli
Understanding the function of unknown genes in Arabidopsis by quantitative real time PCR expression profiling and promoter-reporter expression analysis in transgenic plants
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2090214

printer-friendly version