Gene Model: AT3G05310.1 [Help]
Name (?)    AT3G05310.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Encodes a protein with similarity to MIRO GTPases.
Chromosome   3
Locus (?)    AT3G05310 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
symbol     full name    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   mitochondrion
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_111404  full length CDS
genomic AGI-TIGR 2000-09-08 00:00:00.0 NM_111404  full length genomic
genomic   full length cDNA
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT3G05310.1    648    73065.8    5.1345    Small GTPase superfamily, mitochondrial rho type:IPR021181(1)
                EF-Hand 1, calcium-binding site:IPR018247(2)
                Mitochondrial Rho-like:IPR013684(2)
                EF hand associated, type-1:IPR013566(1)
                EF hand associated, type-2:IPR013567(1)
                EF-HAND 2:IPR018249(2)
Map Locations
chrom map map type (?) coordinates orientation attrib
3 AGI nuc_sequence 1510160 - 1513301 bp forward   details
3 T12H1 assembly_unit 106161 - 109302 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-3142      
coding_region   1-212      
coding_region   607-739      
coding_region   864-1013      
coding_region   1113-1289      
coding_region   1373-1627      
coding_region   1722-1790      
coding_region   1876-1931      
coding_region   2013-2094      
coding_region   2169-2732      
coding_region   2817-2997      
coding_region   3075-3142      
exon   1-212      
intron   213-606      
exon   607-739      
intron   740-863      
exon   864-1013      
intron   1014-1112      
exon   1113-1289      
intron   1290-1372      
exon   1373-1627      
intron   1628-1721      
exon   1722-1790      
intron   1791-1875      
exon   1876-1931      
intron   1932-2012      
exon   2013-2094      
intron   2095-2168      
exon   2169-2732      
intron   2733-2816      
exon   2817-2997      
intron   2998-3074      
exon   3075-3142      
Polymorphism (?)
Showing 15 of 92 entries
(see all)
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_338G06   insertion   exon   unknown
FLAG_448E11   insertion   intron   unknown
GK-454D06-018837   insertion   intron   unknown
GT15164.Ds3.10.16.2004.jx96.645   insertion   exon   unknown
GT15164.Ds5.10.16.2004.jx96.696   insertion   exon   unknown
GT21754.Ds5.09.01.2006.jz13.741   insertion   exon   unknown
GT22103.Ds5.08.30.2006.jz15.755   insertion   promoter   unknown
MASC03221   substitution   coding_region   unknown
MASC03222   substitution   coding_region   unknown
MASC03223   substitution   coding_region   unknown
MASC03224   substitution   coding_region   unknown
MASC04687   substitution   intron   unknown
MASC04688   substitution   intron   unknown
MASC04689   substitution   intron   unknown
MASC04690   substitution   intron   unknown
Showing 8 of 8 entries
Name   Polymorphisms   Background   Stock Name   Select
SAIL_202_D09   SAIL_202_D09.v1     CS809458  
None available  
Phenotypes (?)
None available
SAIL_285_H03   SAIL_285_H03.v2     CS813228  
None available  
Phenotypes (?)
None available
SAIL_331_B05   SAIL_331_B05.v1     CS815385  
None available  
Phenotypes (?)
None available
SALK_013830   SALK_013830     SALK_013830  
None available  
Phenotypes (?)
None available
SALK_013838   SALK_013838     SALK_013838  
None available  
Phenotypes (?)
None available
SALK_017379   SALK_017379     SALK_017379  
None available  
Phenotypes (?)
None available
SALK_017398   SALK_017398     SALK_017398  
None available  
Phenotypes (?)
None available
SALK_065916   SALKseq_065916.0; SALK_065916     SALK_065916  
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2096223

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