Gene Model: AT2G46210.1 [Help]
Name (?)    AT2G46210.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Fatty acid/sphingolipid desaturase;(source:Araport11)
Chromosome   2
Locus (?)    AT2G46210 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
SLD2     SPHINGOID LCB DESATURASE 2    
ATSLD2        
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-25 00:00:00.0 NM_130183  full length CDS
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_130183  full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT2G46210.1    449    51498.0    9.1728    Fatty acid desaturase, type 1:IPR005804(1)
                Cytochrome b5:IPR001199(4)
                Fatty acid/sphingolipid desaturase:IPR012171(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
2 AGI nuc_sequence 18977344 - 18979001 bp forward   details
2 T3F17 assembly_unit 44567 - 46224 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   199-1548      
5' utr   1-198      
coding_region   199-1548      
exon   1-1658      
3' utr   1549-1658      
Polymorphism (?)
Showing 15 of 24 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_173C01   insertion   exon   unknown
FLAG_173H04   insertion   exon   unknown
FLAG_187D03   insertion   promoter   unknown
GK-080E07-016175   insertion   exon   unknown
GK-551F12-022311   insertion   promoter   unknown
GK-819D10-025639   insertion   promoter   unknown
ossowski_1197412   deletion   5'UTR   unknown
ossowski_439338   substitution   coding_region   unknown
ossowski_439340   substitution   coding_region   unknown
ossowski_439341   substitution   coding_region   unknown
ossowski_439343   substitution   coding_region   unknown
ossowski_439346   substitution   3'UTR   unknown
PERL0411838   substitution   promoter   unknown
PERL0411841   substitution   exon   unknown
PERL0411842   substitution   exon   unknown
Germplasm
(?)
Showing 4 of 4 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_36_E04   SAIL_36_E04.v1     CS801740  
Images
None available  
Phenotypes (?)
None available
SALK_013243   SALK_013243     SALK_013243  
Images
None available  
Phenotypes (?)
None available
SALK_013243C   SALK_013243     SALK_013243C  
Images
None available  
Phenotypes (?)
None available
SALK_099275   SALK_099275.55.75.x     SALK_099275  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2062927

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