Gene Model: AT2G46140.1 [Help]
Name (?)    AT2G46140.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Late embryogenesis abundant protein;(source:Araport11)
Chromosome   2
Locus (?)    AT2G46140 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
LEA27     LATE EMBRYOGENESIS ABUNDANT 27    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   cytosol, plasma membrane
Plant structure   expressed in   cultured plant cell
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
mRNA Ceres 2002-04-24 00:00:00.0   full length cDNA
genomic AGI-TIGR 2001-01-25 00:00:00.0 NM_130176  full length CDS
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_130176  full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT2G46140.1    166    17846.2    4.3281    Water stress and hypersensitive response domain:IPR013990(1)
                Late embryogenesis abundant protein, LEA-14:IPR004864(2)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
2 AGI nuc_sequence 18959078 - 18960547 bp forward   details
2 T3F17 assembly_unit 63021 - 64490 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   86-1285      
5' utr   1-85      
coding_region   86-336      
coding_region   1036-1285      
exon   1-336      
intron   337-1035      
exon   1036-1470      
3' utr   1286-1470      
Polymorphism (?)
Showing 15 of 17 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
GK-263D06-014927   insertion   intron   unknown
GK-263E04-014927   insertion   intron   unknown
GK-723D05-025364   insertion   intron   unknown
GK-830C12-025706   insertion   promoter   unknown
GK-846H12-025831   insertion   intron   unknown
ossowski_439303   substitution   promoter   unknown
ossowski_439305   substitution   intron   unknown
PERL0411738   substitution   exon   unknown
PERL0411741   substitution   exon   unknown
PERL0411742   substitution   exon   unknown
PERL0411744   substitution   exon   unknown
PERL0411745   substitution   exon   unknown
PERL0411746   substitution   exon   unknown
SALK_037206.51.85.x   insertion   promoter   unknown
SALK_106690.47.80.x   insertion   promoter   unknown
Germplasm
(?)
Showing 5 of 5 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SALK_037206   SALKseq_037206.0; SALK_037206.51.85.x     SALK_037206  
Images
None available  
Phenotypes (?)
None available
SALK_106690   SALK_106690.47.80.x; SALK_106690.0     SALK_106690  
Images
None available  
Phenotypes (?)
None available
SALK_106690C   SALK_106690.47.80.x     SALK_106690C  
Images
None available  
Phenotypes (?)
None available
SALK_106692   SALK_106692.26.85.x; SALK_106692.2; SALK_106692.1     SALK_106692  
Images
None available  
Phenotypes (?)
None available
SALK_146406   SALK_146406.41.00.x     SALK_146406  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   ; supported by full-length cDNA: Ceres: 2747.   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Marmagne, Anne, Ferro, Myriam, Meinnel, Thierry, Bruley, Christophe, Kuhn, Lauriane, Garin, Jerôme, Barbier-Brygoo, Hélène, Ephritikhine, Geneviève
A high content in lipid-modified peripheral proteins and integral receptor kinases features the Arabidopsis plasma membrane proteome.
    MOLECULAR & CELLULAR PROTEOMICS : MCP.     2007
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2062932

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