Gene Model: AT2G03000.1 [Help]
Name (?)    AT2G03000.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    RING/U-box superfamily protein;(source:Araport11)
Chromosome   2
Locus (?)    AT2G03000 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-25 00:00:00.0 NM_126352  full length CDS
genomic AGI-TIGR 2001-01-25 00:00:00.0 NM_126352  full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT2G03000.1    535    59364.1    10.2731    Zinc finger, RING/FYVE/PHD-type:IPR013083(1)
                Zinc finger, C3HC4 RING-type:IPR018957(1)
                Zinc finger, RING-type:IPR001841(2)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
2 AGI nuc_sequence 875233 - 877207 bp forward   details
2 T17M13 assembly_unit 55471 - 57445 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-1975      
coding_region   1-1240      
coding_region   1608-1975      
exon   1-1240      
intron   1241-1607      
exon   1608-1975      
Polymorphism (?)
Showing 15 of 26 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
ET10985.Ds3.04.02.2003.jw89.614   insertion   exon   unknown
ET3842.Ds3.03.27.00.b.384   insertion   exon   unknown
ossowski_1141780   insertion   promoter   unknown
ossowski_1190601   deletion   promoter   unknown
ossowski_278308   substitution   promoter   unknown
ossowski_278309   substitution   promoter   unknown
ossowski_278310   substitution   promoter   unknown
ossowski_278313   substitution   intron   unknown
ossowski_278314   substitution   intron   unknown
ossowski_278315   substitution   intron   unknown
ossowski_278316   substitution   intron   unknown
ossowski_278317   substitution   intron   unknown
ossowski_278318   substitution   intron   unknown
ossowski_278319   substitution   intron   unknown
ossowski_278320   substitution   coding_region   unknown
Germplasm
(?)
Showing 6 of 6 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS26351   ET3842.Ds3.03.27.00.b.384     CS26351  
Images
None available  
Phenotypes (?)
None available
SALK_025133   SALK_025133.54.50.x     SALK_025133  
Images
None available  
Phenotypes (?)
None available
SALK_025133C   SALK_025133.54.50.x     SALK_025133C  
Images
None available  
Phenotypes (?)
None available
SALK_026880   SALK_026880.53.90.x     SALK_026880  
Images
None available  
Phenotypes (?)
None available
SALK_075108   SALKseq_075108.0; SALK_075108.17.65.x     SALK_075108  
Images
None available  
Phenotypes (?)
None available
SALK_075108C   SALK_075108.17.65.x     SALK_075108C  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
*Town, Chris Redman, Julia Zhuang, Jun Monaghan, Erin Wang, Wei Moskal, William Wu, Hank Quan, Hui Underwood, Beverly Xiao, Yongli
Understanding the function of unknown genes in Arabidopsis by quantitative real time PCR expression profiling and promoter-reporter expression analysis in transgenic plants
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2056764

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