Gene Model: AT2G02890.1 [Help]
Name (?)    AT2G02890.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    F-box family protein;(source:Araport11)
Chromosome   2
Locus (?)    AT2G02890 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-25 00:00:00.0 NM_126344  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT2G02890.1    531    60427.7    6.5062    F-box associated domain, type 3:IPR013187(1)
                F-box domain, cyclin-like:IPR001810(2)
                F-box associated interaction domain:IPR017451(1)
                F-box domain, Skp2-like:IPR022364(1)
                Multi antimicrobial extrusion protein:IPR002528(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
2 AGI nuc_sequence 843913 - 846616 bp reverse   details
2 T17M13 assembly_unit 24151 - 26854 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-2704      
coding_region   1-73      
coding_region   418-729      
coding_region   1451-2092      
coding_region   2136-2704      
exon   1-73      
intron   74-417      
exon   418-729      
intron   730-1450      
exon   1451-2092      
intron   2093-2135      
exon   2136-2704      
Polymorphism (?)
Showing 15 of 34 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
ET14142.Ds3.10.08.2004.jx89.300   insertion   exon   unknown
ET7947.Ds3.09.27.00.b.691   insertion   promoter   unknown
FLAG_302E05   insertion   promoter   unknown
FLAG_327A11   insertion   exon   unknown
FLAG_367B01   insertion   intron   unknown
GK-042F07-026602   insertion   promoter   unknown
GK-042F07-026603   insertion   promoter   unknown
GK-510H12-019520   insertion   exon   unknown
GK-510H12-019542   insertion   exon   unknown
GT15046.Ds3.10.16.2004.jx96.542   insertion   exon   unknown
GT15046.Ds5.10.16.2004.jx96.550   insertion   exon   unknown
GT8235.Ds3.11.07.2002.jw72.448   insertion   intron   unknown
GT8235.Ds5.11.04.2002.jw71.459   insertion   intron   unknown
ossowski_1141763   insertion   coding_region   unknown
ossowski_1190587   deletion   promoter   unknown
Germplasm
(?)
Showing 9 of 9 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_715_F09   SAIL_715_F09.v1; SAIL_715_F09.v2; SAILseq_715_F09.0     CS831733  
Images
None available  
Phenotypes (?)
None available
SALK_072126   SALK_072126.55.75.x     SALK_072126  
Images
None available  
Phenotypes (?)
None available
SALK_072126C   SALK_072126.55.75.x     SALK_072126C  
Images
None available  
Phenotypes (?)
None available
SALK_089426   SALKseq_089426.0; SALK_089426.39.75.x; SALKseq_089426.1     SALK_089426  
Images
None available  
Phenotypes (?)
None available
SALK_089426C   SALK_089426.39.75.x     SALK_089426C  
Images
None available  
Phenotypes (?)
None available
SALK_098174   SALK_098174.44.90.x     SALK_098174  
Images
None available  
Phenotypes (?)
None available
SALK_098179   SALK_098179.52.75.x     SALK_098179  
Images
None available  
Phenotypes (?)
None available
SALK_122987   SALK_122987.31.15.n     SALK_122987  
Images
None available  
Phenotypes (?)
None available
SALK_122987C   SALK_122987.31.15.n     SALK_122987C  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2056734

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