Gene Model: AT1G79760.1 [Help]
Name (?)    AT1G79760.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Identified as target of the AGL15 binding motif CArG.
Chromosome   1
Locus (?)    AT1G79760 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
DTA4     DOWNSTREAM TARGET OF AGL15-4    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   chloroplast
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic   full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G79760.1    299    33670.4    9.001   
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 30012048 - 30013495 bp forward   details
1 F20B17 assembly_unit 74697 - 76144 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   7-995      
5' utr   1-6      
coding_region   7-398      
coding_region   488-995      
exon   1-398      
intron   399-487      
exon   488-1448      
3' utr   996-1448      
Polymorphism (?)
Showing 15 of 28 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
ct55_188E3   substitution   exon   unknown
ct55_189G5   substitution   exon   unknown
ct55_189G5   digest_pattern   exon   unknown
ct55_190E1   digest_pattern   exon   unknown
ct55_190E1   substitution   exon   unknown
ct55_192F5   substitution   exon   unknown
ct55_192F5   digest_pattern   exon   unknown
ct55_196D8   substitution   exon   unknown
ct55_196D8   digest_pattern   exon   unknown
ct55_197G3   digest_pattern   exon   unknown
ct55_197G3   substitution   exon   unknown
GK-738C01-023900   insertion   promoter   unknown
ossowski_266109   substitution   promoter   unknown
ossowski_266116   substitution   3'UTR   unknown
ossowski_266117   substitution   3'UTR   unknown
Germplasm
(?)
Showing 12 of 12 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS92332   cals2_196D8; atcct1y_196D8; ct55_196D8; atsec_196D8     CS92332  
Images
None available  
Phenotypes (?)
None available
CS92359   w40k_197G3; esk1_197G3; ct55_197G3; hira_197G3     CS92359  
Images
None available  
Phenotypes (?)
None available
CS93687   cts_188E3; ct55_188E3; rhd2_188E3     CS93687  
Images
None available  
Phenotypes (?)
None available
CS93787   fla14_i189G5; ct55_189G5; atppt2_189G5; pex17_189G5     CS93787  
Images
None available  
Phenotypes (?)
None available
CS93825   sahh2_190E1; ct55_190E1; a9_190E1; pex4_190E1     CS93825  
Images
None available  
Phenotypes (?)
None available
CS94049   fem111_192F5; ct55_192F5     CS94049  
Images
None available  
Phenotypes (?)
None available
SALK_004857   SALK_004857     SALK_004857  
Images
None available  
Phenotypes (?)
None available
SALK_072711   SALK_072711.49.80.x     SALK_072711  
Images
None available  
Phenotypes (?)
None available
SALK_083683   SALK_083683.56.00.x; SALKseq_083683.0     SALK_083683  
Images
None available  
Phenotypes (?)
None available
SALK_083683C   SALK_083683.56.00.x     SALK_083683C  
Images
None available  
Phenotypes (?)
None available
SALK_097259   SALK_097259.32.95.x     SALK_097259  
Images
None available  
Phenotypes (?)
None available
SALK_097259C   SALK_097259.32.95.x     SALK_097259C  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   predicted by genefinder   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Update History (?)  
AT1G79760.1 replaces AT1G79760.1 on 2004-02-23
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:3688588

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