Gene Model: AT1G72180.1 [Help]
Name (?)    AT1G72180.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.
Chromosome   1
Locus (?)    AT1G72180 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
CEPR2     C-TERMINALLY ENCODED PEPTIDE RECEPTOR 2    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   plasma membrane
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-02-07 00:00:00.0 NM_105877  full length CDS
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_105877  full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G72180.1    977    107903.5    6.3515    Leucine-rich repeat-containing N-terminal, type 2:IPR013210(1)
                Protein kinase-like domain:IPR011009(1)
                Serine/threonine-protein kinase-like domain:IPR017442(1)
                Protein kinase, catalytic domain:IPR000719(1)
                Leucine-rich repeat:IPR001611(6)
                Serine/threonine-protein kinase, active site:IPR008271(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 27162820 - 27167430 bp forward   details
1 T9N14 assembly_unit 26765 - 31375 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1255-4385      
5' utr   1-356      
5' utr   1178-1254      
coding_region   1255-3617      
coding_region   3721-3929      
coding_region   4024-4385      
exon   1-356      
intron   357-1177      
exon   1178-3617      
intron   3618-3720      
exon   3721-3929      
intron   3930-4023      
exon   4024-4611      
3' utr   4386-4611      
Polymorphism (?)
Showing 15 of 43 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
At1g72180-JW   insertion   unknown   unknown
AY199028   insertion   exon   unknown
AY199029   insertion   exon   unknown
AY202110   insertion   exon   unknown
AY202112   insertion   exon   unknown
ET7532.Ds3.01.24.01.PP04.b.176   insertion   exon   unknown
FLAG_031F01   insertion   exon   unknown
FLAG_112A07   insertion   intron   unknown
FLAG_477D09   insertion   intron   unknown
GK-175D09-013517   insertion   promoter   unknown
GK-175D09-013532   insertion   promoter   unknown
GK-572B08-021191   insertion   intron   unknown
GK-572B08-021193   insertion   intron   unknown
GK-588E09-021380   insertion   promoter   unknown
GK-644G02-022818   insertion   exon   unknown
Germplasm
(?)
Showing 13 of 13 entries
 
Name   Polymorphisms   Background   Stock Name   Select
CS26681   AY199028     CS26681  
Images
None available  
Phenotypes (?)
None available
CS31090   At1g72180-JW     CS31090  
Images
None available  
Phenotypes (?)
  • No visible mutant phenotype. Phenotype curated by ABRC.

CS454836   GK-572B08-021191     CS454836  
Images
None available  
Phenotypes (?)
None available
CS461802   GK-644G02-022818     CS461802   not available
Images
None available  
Phenotypes (?)
None available
CS466671   GK-695D11-024553     CS466671  
Images
None available  
Phenotypes (?)
None available
CS800031   SALK_000022     CS800031  
Images
None available  
Phenotypes (?)
None available
SAIL_1285_A11   SAIL_1285_A11     CS879229  
Images
None available  
Phenotypes (?)
None available
SALK_000022   SALK_000022     SALK_000022  
Images
None available  
Phenotypes (?)
None available
SALK_014533   SALK_014533.51.95.x     SALK_014533  
Images
None available  
Phenotypes (?)
None available
SALK_014533C   SALK_014533.51.95.x     SALK_014533C   not available
Images
None available  
Phenotypes (?)
None available
SALK_081193   SALK_081193.36.20.x; SALKseq_081193.0     SALK_081193  
Images
None available  
Phenotypes (?)
None available
SALK_081193C   SALK_081193.36.20.x     SALK_081193C  
Images
None available  
Phenotypes (?)
None available
WiscDsLox433E9   WiscDsLox433E9.1; WiscDsLox433E9; WiscDsLox433E9.0     CS855588  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to GI:3641252 from (Malus x domestica) (Plant Mol. Biol. 40 (6), 945-957 (1999))   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2207035

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