Gene Model: AT1G68240.1 [Help]
Name (?)    AT1G68240.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G68240 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic   full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G68240.1    185    21673.4    5.3259    Helix-loop-helix DNA-binding:IPR011598(1)
                Helix-loop-helix DNA-binding domain:IPR001092(3)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 25574864 - 25576129 bp reverse   details
1 T22E19 assembly_unit 67736 - 69001 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   64-951      
5' utr   1-63      
coding_region   64-294      
coding_region   372-440      
coding_region   538-603      
coding_region   692-844      
coding_region   913-951      
exon   1-294      
intron   295-371      
exon   372-440      
intron   441-537      
exon   538-603      
intron   604-691      
exon   692-844      
intron   845-912      
exon   913-1266      
3' utr   952-1266      
Polymorphism (?)
Showing 15 of 36 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
ossowski_1139689   insertion   5'UTR   unknown
ossowski_1139690   insertion   intron   unknown
ossowski_1188378   deletion   intron   unknown
ossowski_1188379   deletion   intron   unknown
ossowski_1188380   deletion   intron   unknown
ossowski_237746   substitution   5'UTR   unknown
ossowski_237747   substitution   5'UTR   unknown
ossowski_237748   substitution   5'UTR   unknown
ossowski_237749   substitution   5'UTR   unknown
ossowski_237750   substitution   5'UTR   unknown
ossowski_237751   substitution   5'UTR   unknown
ossowski_237751   substitution   intron   unknown
ossowski_237752   substitution   intron   unknown
ossowski_237752   substitution   5'UTR   unknown
ossowski_237754   substitution   coding_region   unknown
External Link   
Plant Proteome Database
AGI-TIGR's comment   predicted by genscan+   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Heim, Marc A,Jakoby, Marc,Werber, Martin,Martin, Cathie,Weisshaar, Bernd,Bailey, Paul C
The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.
    MOLECULAR BIOLOGY AND EVOLUTION     2003
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2199306

printer-friendly version