Gene Model: AT1G53020.1 [Help]
Name (?)    AT1G53020.1
Name Type (?)    orf
Gene Model Type (?)    pseudogene
Description    pseudogene of Ubiquitin-conjugating enzyme family protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G53020 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic   full length genomic
genomic   full length cDNA
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G53020    326    37292.0       
Map Locations
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 19751372 - 19753064 bp reverse   details
1 F8L10 assembly_unit 72877 - 74569 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
exon   1-234      
intron   235-370      
exon   371-487      
intron   488-594      
exon   595-658      
intron   659-733      
exon   734-873      
intron   874-955      
exon   956-1267      
intron   1268-1378      
exon   1379-1693      
Polymorphism (?)
Showing 15 of 43 entries
(see all)
name (?)   type (?)   Polymorphism site   Allele type (?)
AMU-1-375   deletion   unknown   unknown
AMU-1-375   deletion   unknown   unknown
ET8233.Ds3.10.13.00.b.641   insertion   exon   unknown
GK-695C12-024553   insertion   intron   unknown
GK-695C12-024558   insertion   intron   unknown
ossowski_1136406   insertion   intron   unknown
ossowski_170380   substitution   intron   unknown
ossowski_170382   substitution   intron   unknown
ossowski_170384   substitution   intron   unknown
ossowski_170400   substitution   promoter   unknown
PERL0168236   substitution   intron   unknown
PERL0168239   substitution   intron   unknown
PERL0168242   substitution   intron   unknown
PERL0168251   substitution   coding_region   unknown
PERL0168251   substitution   exon   unknown
Showing 6 of 6 entries
Name   Polymorphisms   Background   Stock Name   Select
CS466660   GK-695C12-024553     CS466660  
None available  
Phenotypes (?)
None available
SALK_053395   SALK_053395.50.95.x; SALKseq_053395.0; SALKseq_053395.1     SALK_053395  
None available  
Phenotypes (?)
None available
SALK_053395C   SALK_053395.50.95.x     SALK_053395C  
None available  
Phenotypes (?)
None available
SALK_137417   SALK_137417.23.45.n; SALKseq_137417.1     SALK_137417  
None available  
Phenotypes (?)
None available
SALK_137419   SALKseq_137419.3; SALKseq_137419.5; SALKseq_137419.2; SALKseq_137419.201; SALKseq_137419.6; SALKseq_137419.0; SALKseq_137419.1; SALKseq_137419.7; SALK_137419.28.20.x; SALKseq_137419.4; SALKseq_137419.8; SALKseq_137419.101     SALK_137419  
None available  
Phenotypes (?)
None available
SALK_137427   SALK_137427.45.25.x; SALKseq_137427.1     SALK_137427  
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to GB:3319990 from (Mus musculus)   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
Publication (?)   
author/title     source     date
*Hirotaka, Takahashi Motoaki, Seki Kazuo, Shinozaki Tatsuya, Sawasaki Yaeta, Endo
High-throughput detection of ubiquitination and poly-ubiquitination based on wheat cell-free protein production system
Update History (?)  
AT1G53020.1 added from split AT1G53023.1 on 2010-09-02
AT1G53020.1 added from split AT1G53025.1 on 2010-09-02
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2011525

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