Gene Model: AT1G35340.1 [Help]
Name (?)    AT1G35340.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    ATP-dependent protease La (LON) domain protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G35340 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   chloroplast
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic   full length CDS
genomic   full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G35340.1    316    35319.2    7.6664    Peptidase S16, lon N-terminal:IPR003111(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 12977765 - 12979910 bp forward   details
1 T9I1 assembly_unit 69544 - 71689 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   4-1985      
5' utr   1-3      
coding_region   4-249      
coding_region   316-384      
coding_region   472-591      
coding_region   676-750      
coding_region   1177-1314      
coding_region   1500-1641      
coding_region   1825-1985      
exon   1-249      
intron   250-315      
exon   316-384      
intron   385-471      
exon   472-591      
intron   592-675      
exon   676-750      
intron   751-1176      
exon   1177-1314      
intron   1315-1499      
exon   1500-1641      
intron   1642-1824      
exon   1825-2146      
3' utr   1986-2146      
Polymorphism (?)
Showing 15 of 129 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_438A12   insertion   promoter   unknown
GK-695G02-024558   insertion   exon   unknown
MASC02281   substitution   coding_region   unknown
MASC07123   substitution   coding_region   unknown
MASC07123   substitution   exon   unknown
MASC07124   substitution   coding_region   unknown
MASC07124   substitution   exon   unknown
MASC07125   substitution   exon   unknown
MASC07125   substitution   coding_region   unknown
MASC07126   substitution   coding_region   unknown
MASC07127   substitution   coding_region   unknown
ossowski_1133957   insertion   intron   unknown
ossowski_1133958   insertion   intron   unknown
ossowski_1182458   deletion   5'UTR   unknown
ossowski_1182459   deletion   intron   unknown
Germplasm
(?)
Showing 11 of 11 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_1233_E11   SAIL_1233_E11.v1     CS845195  
Images
None available  
Phenotypes (?)
None available
SAIL_1233_F11   SAIL_1233_F11.v1     not an ABRC stock  
Images
None available  
Phenotypes (?)
None available
SALK_016590   SALK_016590     SALK_016590  
Images
None available  
Phenotypes (?)
None available
SALK_016590C   SALK_016590     SALK_016590C  
Images
None available  
Phenotypes (?)
None available
SALK_020796   SALK_020796.51.65.x     SALK_020796  
Images
None available  
Phenotypes (?)
None available
SALK_043430   SALK_043430     SALK_043430  
Images
None available  
Phenotypes (?)
None available
SALK_043439   SALK_043439     SALK_043439  
Images
None available  
Phenotypes (?)
None available
SALK_060031   SALKseq_060031.1; SALK_060031.55.00.x; SALKseq_060031.0; SALKseq_060031.2     SALK_060031  
Images
None available  
Phenotypes (?)
None available
SALK_120979   SALKseq_120979.0; SALK_120979.23.85.x     SALK_120979  
Images
None available  
Phenotypes (?)
None available
SALK_120979C   SALK_120979.23.85.x     SALK_120979C  
Images
None available  
Phenotypes (?)
None available
SALK_139929   SALK_139929.52.80.x     SALK_139929  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Zybailov, Boris, Rutschow, Heidi, Friso, Giulia, Rudella, Andrea, Emanuelsson, Olof, Sun, Qi, van Wijk, Klaas J
Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.
    PLOS ONE     2008
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2206731

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