Gene Model: AT1G22330.1 [Help]
Name (?)    AT1G22330.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G22330 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
mRNA Ceres 2002-04-23 00:00:00.0   full length cDNA
genomic   full length genomic
genomic   full length CDS
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G22330.1    291    31980.5    6.6021    Nucleotide-binding, alpha-beta plait:IPR012677(1)
                RNA recognition motif domain:IPR000504(3)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 7886542 - 7889534 bp forward   details
1 T16E15 assembly_unit 11501 - 14493 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   152-2700      
5' utr   1-151      
coding_region   152-337      
coding_region   410-533      
coding_region   911-1028      
coding_region   1450-1483      
coding_region   1776-2082      
coding_region   2594-2700      
exon   1-337      
intron   338-409      
exon   410-533      
intron   534-910      
exon   911-1028      
intron   1029-1449      
exon   1450-1483      
intron   1484-1775      
exon   1776-2082      
intron   2083-2593      
exon   2594-2993      
3' utr   2701-2993      
Polymorphism (?)
Showing 15 of 17 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
15-0787-1   insertion   exon   unknown
ET13859.Ds3.08.25.2004.jx83.345   insertion   promoter   unknown
ET13859.Ds5.08.25.2004.jx83.260   insertion   promoter   unknown
ossowski_1131457   insertion   3'UTR   unknown
ossowski_48788   substitution   promoter   unknown
ossowski_48789   substitution   coding_region   unknown
ossowski_48790   substitution   intron   unknown
ossowski_48791   substitution   intron   unknown
PERL0057838   substitution   promoter   unknown
PERL0057843   substitution   intron   unknown
PERL0057844   substitution   intron   unknown
PERL0057846   substitution   intron   unknown
PERL0057849   substitution   exon   unknown
SAIL_818_E12.v1   insertion   intron   unknown
SALK_011929.40.65.x   insertion   exon   unknown
Germplasm
(?)
Showing 4 of 4 entries
 
Name   Polymorphisms   Background   Stock Name   Select
15-0787-1   15-0787-1     not an ABRC stock  
Images
None available  
Phenotypes (?)
None available
SAIL_818_E12   SAIL_818_E12.v1     CS836587  
Images
None available  
Phenotypes (?)
None available
SALK_092240   SALK_092240.54.25.x     SALK_092240  
Images
None available  
Phenotypes (?)
None available
SALK_118898   SALK_118898.56.00.x     SALK_118898  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   ; supported by full-length cDNA: Ceres: 41224.   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Update History (?)  
AT1G22330.1 replaces AT1G22335.1 on 2008-03-12
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2196520

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