Gene Model: AT1G17910.1 [Help]
Name (?)    AT1G17910.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Wall-associated kinase family protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G17910 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-03-12 00:00:00.0 NM_101654  full length CDS
genomic AGI-TIGR 2001-03-12 00:00:00.0 NM_101654  full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G17910.1    764    85211.1    6.9677    Protein kinase-like domain:IPR011009(1)
                Protein kinase, catalytic domain:IPR000719(1)
                Wall-associated kinase:IPR013695(1)
                Serine-threonine/tyrosine-protein kinase:IPR001245(1)
                Serine/threonine-protein kinase, active site:IPR008271(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 6159126 - 6161615 bp forward   details
1 F2H15 assembly_unit 40137 - 42626 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   1-2490      
coding_region   1-1021      
coding_region   1117-1242      
coding_region   1343-2490      
exon   1-1021      
intron   1022-1116      
exon   1117-1242      
intron   1243-1342      
exon   1343-2490      
Polymorphism (?)
Showing 15 of 88 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_046D04   insertion   promoter   unknown
GK-464B05-018954   insertion   intron   unknown
GK-641B02-022259   insertion   exon   unknown
GK-641B02-022816   insertion   exon   unknown
GK-641B02-023145   insertion   exon   unknown
ossowski_1130864   insertion   promoter   unknown
ossowski_37953   substitution   promoter   unknown
ossowski_37954   substitution   promoter   unknown
ossowski_37955   substitution   promoter   unknown
ossowski_37959   substitution   promoter   unknown
ossowski_37961   substitution   promoter   unknown
ossowski_37963   substitution   promoter   unknown
ossowski_37965   substitution   promoter   unknown
ossowski_37973   substitution   coding_region   unknown
ossowski_37977   substitution   coding_region   unknown
Germplasm
(?)
Showing 6 of 6 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SALK_044048   SALK_044048.50.80.x     SALK_044048  
Images
None available  
Phenotypes (?)
None available
SALK_044048C   SALK_044048.50.80.x     SALK_044048C  
Images
None available  
Phenotypes (?)
None available
SALK_088655   SALKseq_088655.1; SALK_088655.21.00.x; SALKseq_088655.2; SALKseq_088655.0     SALK_088655  
Images
None available  
Phenotypes (?)
None available
SALK_088655C   SALK_088655.21.00.x     SALK_088655C  
Images
None available  
Phenotypes (?)
None available
SALK_124769   SALK_124769.22.05.x; SALKseq_124769.1     SALK_124769  
Images
None available  
Phenotypes (?)
None available
SALK_124809   SALKseq_124809.0; SALK_124809.31.25.x     SALK_124809  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   contains similarity to wall-associated kinase 4 GI:3355308 from (Arabidopsis thaliana)   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
*Town, Chris Redman, Julia Zhuang, Jun Monaghan, Erin Wang, Wei Moskal, William Wu, Hank Quan, Hui Underwood, Beverly Xiao, Yongli
Understanding the function of unknown genes in Arabidopsis by quantitative real time PCR expression profiling and promoter-reporter expression analysis in transgenic plants
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2030987

printer-friendly version