Gene Model: AT1G14580.1 [Help]
Name (?)    AT1G14580.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    C2H2-like zinc finger protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G14580 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
BLJ     BLUEJAY    
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-01-29 00:00:00.0 NM_101325  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G14580.1    467    50636.0    9.4827    Zinc finger, C2H2:IPR007087(2)
                Zinc finger, C2H2-like:IPR015880(3)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 4989563 - 4992732 bp forward   details
1 T5E21 assembly_unit 27035 - 30204 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   508-2880      
5' utr   1-228      
5' utr   480-507      
coding_region   508-694      
coding_region   922-1318      
coding_region   2061-2880      
exon   1-228      
intron   229-479      
exon   480-694      
intron   695-921      
exon   922-1318      
intron   1319-2060      
exon   2061-3170      
3' utr   2881-3170      
Polymorphism (?)
Showing 12 of 12 entries
 
name (?)   type (?)   Polymorphism site   Allele type (?)
blj   insertion   unknown   loss-of-function
MN1_4992106   substitution   exon   unknown
MN1_4992106   substitution   coding_region   unknown
PERL0035091   substitution   coding_region   unknown
PERL0035091   substitution   exon   unknown
PERL0035094   substitution   coding_region   unknown
PERL0035094   substitution   exon   unknown
SAIL_705_G09   insertion   intron   unknown
SALK_009022.41.95.x   insertion   intron   unknown
SGCSNP9777   insertion   intron   unknown
SGCSNP9778   insertion   intron   unknown
WiscDsLox413-416J13   insertion   promoter   unknown
Germplasm
(?)
Showing 3 of 3 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_705_G09   SAIL_705_G09     CS876084  
Images
None available  
Phenotypes (?)
None available
SALK_009022   SALK_009022.41.95.x     SALK_009022  
Images
None available  
Phenotypes (?)
None available
WiscDsLox413-416J13   WiscDsLox413-416J13; WiscDsLox413-416J13.1; WiscDsLox413-416J13.0     CS854759  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   similar to zinc finger protein ID1 GB:AAC18941 GI:3170601 from (Zea mays)   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Day, Robert *Macknight, Richard
The arabidopsis proliferative endosperm transcriptome
    19TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2008
Lee, Ji-Young, Colinas, Juliette, Wang, Jean Y, Mace, Daniel, Ohler, Uwe, Benfey, Philip N
Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA     2006
Riechmann, J L,Heard, J,Martin, G,Reuber, L,Jiang, C,Keddie, J,Adam, L,Pineda, O,Ratcliffe, O J,Samaha, R R,Creelman, R,Pilgrim, M,Broun, P,Zhang, J Z,Ghandehari, D,Sherman, B K,Yu, G
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    SCIENCE     2000
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2204502

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