Gene Model: AT1G14130.1 [Help]
Name (?)    AT1G14130.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    DAO1 is an IAA oxidase expressed in many different plant parts. it is a member of a family of dioxygenase and 2OG Fe(II) oxygenase domain and DAO domain containing proteins. It appears to be the major IAA oxidase in planta and major contributor to IAA degradation.
Chromosome   1
Locus (?)    AT1G14130 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
DAO1     DIOXYGENASE FOR AUXIN OXIDATION 1    
ATDAO        
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus, cytoplasm
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-03-12 00:00:00.0 NM_101278  full length CDS
genomic   full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G14130.1    308    34634.3    5.6205    Oxoglutarate/iron-dependent oxygenase:IPR005123(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 4835724 - 4837616 bp reverse   details
1 F7A19 assembly_unit 78776 - 80668 bp reverse
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   577-1576      
5' utr   1-127      
5' utr   548-576      
coding_region   577-923      
coding_region   997-1576      
exon   1-127      
intron   128-547      
exon   548-923      
intron   924-996      
exon   997-1893      
3' utr   1577-1893      
Polymorphism (?)
Showing 15 of 38 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
dao1-1   insertion   exon   unknown
dao1-3   insertion   promoter   unknown
FLAG_549C12   insertion   promoter   unknown
FLAG_549C12   insertion   exon   unknown
GK-207H09-014550   insertion   exon   unknown
GK-207H09-014550   insertion   promoter   unknown
GK-207H09-014553   insertion   promoter   unknown
GK-207H09-014553   insertion   exon   unknown
GK-723D04-025364   insertion   exon   unknown
GK-723D04-025364   insertion   promoter   unknown
GK-723D04-025365   insertion   exon   unknown
GK-723D04-025365   insertion   promoter   unknown
GK-793D07-024938   insertion   promoter   unknown
GK-793D07-025016   insertion   promoter   unknown
ossowski_30718   substitution   5'UTR   unknown
Germplasm
(?)
Showing 7 of 7 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_714_H04   SAIL_714_H04     CS876194  
Images
None available  
Phenotypes (?)
None available
SAIL_765_E10   SAIL_765_E10.v1     CS834246  
Images
None available  
Phenotypes (?)
None available
SAIL_916_A08   SAIL_916_A08.v1     not an ABRC stock  
Images
None available  
Phenotypes (?)
None available
SALK_019661   SALK_019661.48.50.x     SALK_019661  
Images
None available  
Phenotypes (?)
None available
SALK_082522   SALKseq_082522.0; dao1-3     SALK_082522  
Images
None available  
Phenotypes (?)

SALK_093162   dao1-1     SALK_093162  
Images
None available  
Phenotypes (?)

SALK_095931   SALK_095931.35.95.x     SALK_095931  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   very similar to adventitious rooting related oxygenase; Very similar to 2-oxoacid dependent dioxygenase from Malus domestica, gi 3492806   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     date
Colm Nolan, Thomas Gallagher
Investigating the Role of Arabidopsis thaliana Genes At1G14120 and At1G14130 in Adventitious Rooting.
    18TH INTERNATIONAL CONFERENCE ON ARABIDOPSIS RESEARCH     2007
Bae, M S,Cho, E J,Choi, E Y,Park, O K
Analysis of the Arabidopsis nuclear proteome and its response to cold stress.
    THE PLANT JOURNAL     2003
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2035858

printer-friendly version