Gene Model: AT1G07140.1 [Help]
Name (?)    AT1G07140.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Encodes a putative Ran-binding protein (siRanBP).
Chromosome   1
Locus (?)    AT1G07140 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Symbols  
symbol     full name    
SIRANBP        
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2001-02-20 00:00:00.0 NM_100588  full length CDS
genomic   full length genomic
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G07140.1    228    25601.2    4.6122    Pleckstrin homology-type:IPR011993(1)
                Ran binding protein 1:IPR000156(3)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 2191723 - 2193793 bp reverse   details
1 F10K1 assembly_unit 45636 - 47706 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   106-1434      
5' utr   1-105      
coding_region   106-260      
coding_region   381-532      
coding_region   639-764      
coding_region   1181-1434      
exon   1-260      
intron   261-380      
exon   381-532      
intron   533-638      
exon   639-764      
intron   765-1180      
exon   1181-2071      
3' utr   1435-2071      
Polymorphism (?)
Showing 15 of 39 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
GK-064D01-026597   insertion   exon   unknown
GK-132E05-013051   insertion   exon   unknown
GK-750H08-024968   insertion   promoter   unknown
GK-750H08-024970   insertion   promoter   unknown
MASC08766   substitution   coding_region   unknown
MASC08980   substitution   coding_region   unknown
ossowski_11694   substitution   5'UTR   unknown
ossowski_11700   substitution   3'UTR   unknown
ossowski_1177803   deletion   5'UTR   unknown
PERL0014087   substitution   exon   unknown
PERL0014088   substitution   5'UTR   unknown
PERL0014088   substitution   exon   unknown
PERL0014090   substitution   exon   unknown
PERL0014091   substitution   intron   unknown
PERL0014098   substitution   exon   unknown
Germplasm
(?)
Showing 12 of 12 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_110_F08   SAIL_110_F08.v1     CS805387  
Images
None available  
Phenotypes (?)
None available
SAIL_155_B06   SAIL_155_B06     CS871609  
Images
None available  
Phenotypes (?)
None available
SALK_002074   SALK_002074.51.00.x     SALK_002074  
Images
None available  
Phenotypes (?)
None available
SALK_002077   SALK_002077.49.50.x     SALK_002077  
Images
None available  
Phenotypes (?)
None available
SALK_002081   SALK_002081     SALK_002081  
Images
None available  
Phenotypes (?)
None available
SALK_066542   SALK_066542; SALKseq_066542.0; SALKseq_066542.1     SALK_066542  
Images
None available  
Phenotypes (?)
None available
SALK_085533   SALK_085533.51.85.x     SALK_085533  
Images
None available  
Phenotypes (?)
None available
SALK_092991   SALK_092991.51.50.x     SALK_092991  
Images
None available  
Phenotypes (?)
None available
SALK_097598   SALK_097598.29.60.x     SALK_097598  
Images
None available  
Phenotypes (?)
None available
SALK_097606   SALK_097606.54.50.x     SALK_097606  
Images
None available  
Phenotypes (?)
None available
SALK_111338   SALK_111338.1; SALK_111338.43.65.x     SALK_111338  
Images
None available  
Phenotypes (?)
None available
SALK_111340   SALK_111340.0; SALK_111340.52.20.x     SALK_111340  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   identical to Ran-binding protein (atranbp1a) GI:2058282 from (Arabidopsis thaliana); supported by cDNA: gi 15294205 gb AF410294.1 AF410294   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2007466

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