Gene Model: AT1G04000.1 [Help]
Name (?)    AT1G04000.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    hypothetical protein;(source:Araport11)
Chromosome   1
Locus (?)    AT1G04000 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Annotations (?)  
Category   Relationship Type (?)   Keyword (?)
GO Cellular Component   located in   nucleus
Annotation Detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
mRNA Ceres 2002-04-23 00:00:00.0   full length cDNA
genomic AGI-TIGR 2001-03-06 00:00:00.0 NM_100281  full length CDS
genomic   full length cDNA
genomic   full length genomic
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G04000.1    152    16853.2    10.4693   
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 1028106 - 1029119 bp reverse   details
1 F21M11 assembly_unit 27761 - 28774 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   247-705      
5' utr   1-246      
coding_region   247-705      
exon   1-1014      
3' utr   706-1014      
Polymorphism (?)
Showing 15 of 25 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
FLAG_210H03   insertion   exon   unknown
FLAG_320H05   insertion   exon   unknown
GK-191H10-014642   insertion   promoter   unknown
GK-277G11-015121   insertion   exon   unknown
GK-277G11-015155   insertion   exon   unknown
GK-384C05-017271   insertion   exon   unknown
GK-760B01-024594   insertion   promoter   unknown
GK-760B01-024639   insertion   promoter   unknown
ossowski_1177469   deletion   3'UTR   unknown
ossowski_5717   substitution   promoter   unknown
PERL0006866   substitution   exon   unknown
PERL0006867   substitution   exon   unknown
PERL0006868   substitution   exon   unknown
PERL0006869   substitution   exon   unknown
PERL0006870   substitution   promoter   unknown
Germplasm
(?)
Showing 10 of 10 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_292_C05   SAILseq_292_C05.2; SAIL_292_C05.v1; SAILseq_292_C05.1     CS813532  
Images
None available  
Phenotypes (?)
None available
SALK_020759   SALK_020759.36.25.x     SALK_020759  
Images
None available  
Phenotypes (?)
None available
SALK_039239   SALK_039239.54.90.x     SALK_039239  
Images
None available  
Phenotypes (?)
None available
SALK_060673   SALK_060673.41.95.x; SALKseq_060673.1     SALK_060673  
Images
None available  
Phenotypes (?)
None available
SALK_060673C   SALK_060673.41.95.x     SALK_060673C  
Images
None available  
Phenotypes (?)
None available
SALK_063848   SALK_063848.49.50.x     SALK_063848  
Images
None available  
Phenotypes (?)
None available
SALK_144098   SALK_144098.56.00.x     SALK_144098  
Images
None available  
Phenotypes (?)
None available
SALK_144098C   SALK_144098.56.00.x     SALK_144098C  
Images
None available  
Phenotypes (?)
None available
WiscDsLox241C09   WiscDsLox241C09.1; WiscDsLox241C09.0; WiscDsLox241C09     CS849479  
Images
None available  
Phenotypes (?)
None available
WiscDsLox476E02   WiscDsLox476E02     CS857613  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
AGI-TIGR's comment   Location of ESTs 203I24T7, gb H76794 and 203I24XP, gb AA605510;supported by full-length cDNA: Ceres:9756.   2002-05-02
Community Comments (?) (shows only the most recent comments by default)
 
     
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:2024136

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