Gene Model: AT1G02190.1 [Help]
Name (?)    AT1G02190.1
Name Type (?)    orf
Gene Model Type (?)    protein_coding
Description    Fatty acid hydroxylase superfamily;(source:Araport11)
Chromosome   1
Locus (?)    AT1G02190 (Note: use this locus link to see all functional annotations, associated gene models, markers and ESTs).
Map Detail Image  
detail
Sequence (?)  
Bio Source (?) Source Date GenBank Accession Sequence
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_100099  full length genomic
genomic AGI-TIGR 2004-03-04 18:34:00.0 NM_100099  full length CDS
genomic   full length cDNA
protein
Protein Data  
name   Length(aa)   molecular weight   isoelectric point   domains( # of domains)
AT1G02190.1    627    72091.9    7.7311    Uncharacterised domain Wax2, C-terminal:IPR021940(1)
                Fatty acid hydroxylase:IPR006694(1)
Map Locations
(?)
 
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 415079 - 418010 bp forward   details
1 T7I23 assembly_unit 65467 - 68398 bp forward
Map Links (?)   Map Viewer     Sequence Viewer     GBrowse  
Gene Feature (?)  
type   coordinates   annotation source   date  
ORF   76-2718      
5' utr   1-75      
coding_region   76-592      
coding_region   664-883      
coding_region   967-1357      
coding_region   1653-1760      
coding_region   1884-2084      
coding_region   2170-2442      
coding_region   2545-2718      
exon   1-592      
intron   593-663      
exon   664-883      
intron   884-966      
exon   967-1357      
intron   1358-1652      
exon   1653-1760      
intron   1761-1883      
exon   1884-2084      
intron   2085-2169      
exon   2170-2442      
intron   2443-2544      
exon   2545-2932      
3' utr   2719-2932      
Polymorphism (?)
Showing 15 of 45 entries
(see all)
 
name (?)   type (?)   Polymorphism site   Allele type (?)
GK-348H10-016247   insertion   exon   unknown
GK-348H10-016247   insertion   promoter   unknown
ossowski_2346   substitution   5'UTR   unknown
ossowski_2348   substitution   intron   unknown
ossowski_2349   substitution   intron   unknown
ossowski_2350   substitution   intron   unknown
ossowski_2351   substitution   intron   unknown
ossowski_2352   substitution   intron   unknown
ossowski_2353   substitution   intron   unknown
ossowski_2354   substitution   intron   unknown
ossowski_2355   substitution   intron   unknown
ossowski_2356   substitution   intron   unknown
ossowski_2357   substitution   intron   unknown
ossowski_2360   substitution   intron   unknown
ossowski_2361   substitution   intron   unknown
Germplasm
(?)
Showing 7 of 7 entries
 
Name   Polymorphisms   Background   Stock Name   Select
SAIL_1142_F07   SAIL_1142_F07.v1     CS841962  
Images
None available  
Phenotypes (?)
None available
SALK_132232   SALK_132232.41.05.x     SALK_132232  
Images
None available  
Phenotypes (?)
None available
SALK_132240   SALK_132240.45.00.x     SALK_132240  
Images
None available  
Phenotypes (?)
None available
SALK_132241   SALK_132241.55.75.x     SALK_132241  
Images
None available  
Phenotypes (?)
None available
SALK_134809   SALKseq_134809.1; SALK_134809.28.85.x     SALK_134809  
Images
None available  
Phenotypes (?)
None available
SALK_134811   SALK_134811.43.90.x; SALKseq_134811.2; SALKseq_134811.0; SALKseq_134811.1     SALK_134811  
Images
None available  
Phenotypes (?)
None available
SALK_134811C   SALK_134811.43.90.x     SALK_134811C  
Images
None available  
Phenotypes (?)
None available

    (European Users)
External Link   
Plant Proteome Database
Community Comments (?) (shows only the most recent comments by default)
 
     
Update History (?)  
AT1G02190.1 replaces AT1G02190.1 on 2004-02-23
Date last modified (?)    2017-04-16
TAIR Accession (?)    Gene:3435874

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